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JNCI Journal of the National Cancer Institute 2006 98(6):396-406; doi:10.1093/jnci/djj093
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© The Author 2006. Published by Oxford University Press.

ARTICLE

Epigenetic Modulation of Tumor Suppressor CCAAT/Enhancer Binding Protein {alpha} Activity in Lung Cancer

Yasuhiro Tada, Romulo Martin Brena, Björn Hackanson, Carl Morrison, Gregory A. Otterson, Christoph Plass

Affiliations of authors: Department of Molecular Virology, Immunology, and Medical Genetics, Division of Human Cancer Genetics (YT, RMB, BH, CP), Department of Pathology (CM), Department of Internal Medicine, Division of Hematology and Oncology (GAO, CP), The Comprehensive Cancer Center, The Ohio State University, Columbus, OH; Department of Hematology and Oncology, University of Freiburg Medical Center, Freiburg, Germany (BH)

Correspondence to: Christoph Plass, PhD, The Ohio State University, Division of Human Cancer Genetics, Tzagournis Medical Research Facility 464A, 420 West 12th Ave., Columbus, OH 43210 (e-mail: christoph.plass{at}osumc.edu).

Background: Loss of tumor suppressor CCAAT/enhancer-binding protein-{alpha} (C/EBP{alpha}) expression is seen in several human malignancies, including acute myelogenous leukemia and lung cancer. We hypothesized that DNA methylation and histone acetylation of the C/EBP{alpha} promoter may modulate C/EBP{alpha} expression in lung cancer. Methods: We analyzed C/EBP{alpha} expression in 15 human lung cancer cell lines and in 122 human lung primary tumors by northern blotting, immunoblotting, and immunohistochemistry. C/EBP{alpha} promoter methylation was assessed using bisulfite sequencing, combined bisulfite restriction analysis, methylation-specific polymerase chain reaction, and Southern blotting. We examined the acetylation status of histones H3 and H4 at the C/EBP{alpha} promoter by chromatin immunoprecipitation. Binding of methyl-CpG–binding proteins MeCP2 and MBD2 and upstream stimulatory factor (USF) to the C/EBP{alpha} promoter was assayed in cell lines that were untreated or treated with histone deacetylase inhibitor trichostatin A and demethylating agent 5-aza-2'-deoxycytidine (5-aza-dC) by chromatin immunoprecipitation and by electrophoretic mobility shift assays. Results: DNA methylation and histone acetylation in the upstream region (–1422 to –896) of the C/EBP{alpha} promoter were associated with low or absent C/EBP{alpha} expression in 12 of 15 lung cancer cell lines and in 81 of 120 primary lung tumors. MeCP2 and MBD binding to the upstream C/EBP{alpha} promoter was detected in C/EBP{alpha}-nonexpressing cell lines; USF binding was detected in C/EBP{alpha}-expressing cell lines; however, in C/EBP{alpha}-nonexpressing cell lines USF binding was detected only after trichostatin A and 5-aza-dC treatment. Conclusions: DNA hypermethylation of the upstream C/EBP{alpha} promoter region, not the core promoter region as previously reported, is critical in the regulation of C/EBP{alpha} expression in human lung cancer.



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