© 2000 by Oxford University Press
Journal of the National Cancer Institute, Vol. 92, No. 22, 1805-1811,
November 15, 2000
© 2000 Oxford University Press
Hypermethylated APC DNA in Plasma and Prognosis of Patients With Esophageal Adenocarcinoma
Affiliations of authors: K. Kawakami, J. Brabender, K. D. Danenberg, P. V. Danenberg (Department of Biochemistry and Molecular Biology and Norris Cancer Center), R. V. Lord, T. R. Demeester (Department of Surgery), S. Groshen (Department of Biostatistics and Epidemiology), Keck School of Medicine, University of Southern California, Los Angeles; B. D. Greenwald, J. Yin, A. S. Fleisher, J. M. Abraham, S. J. Meltzer (Department of Medicine, Gastroenterology Division), M. J. Krasna (Division of Thoracic Surgery and Surgical Oncology), Greenebaum Cancer Center, University of Maryland School of Medicine, and Baltimore Veterans Affairs Hospital; D. G. Beer, Department of Surgery, University of Michigan School of Medicine, Ann Arbor; D. Sidransky, Division of Head and Neck Cancer Research, The Johns Hopkins University, Baltimore; H. T. Huss, D. H. Ilson, D. P. Kelsen, Gastroenterology Oncology Service, Memorial Sloan-Kettering Cancer Center, Cornell University Medical College, New York, NY; C. Eads, P. W. Laird, Department of Biochemistry and Molecular Biology and Norris Cancer Center and Department of Surgery, University of Southern California Keck School of Medicine; D. Harpole, M. Moore, Department of Surgery, Duke University Medical Center, Durham, NC.
Correspondence to: Stephen J. Meltzer, M.D., University of Maryland School of Medicine, 22 S. Greene St., Rm. N3W62, Baltimore, MD 21201 (e-mail: smeltzer{at}medicine.umaryland.edu).
Background: The adenomatous polyposis coli (APC) locus on chromosome 5q2122 shows frequent loss of heterozygosity (LOH) in esophageal carcinomas. However, the prevalence of truncating mutations in the APC gene in esophageal carcinomas is low. Because hypermethylation of promoter regions is known to affect several other tumor suppressor genes, we investigated whether the APC promoter region is hypermethylated in esophageal cancer patients and whether this abnormality could serve as a prognostic plasma biomarker. Methods: We assayed DNA from tumor tissue and matched plasma from esophageal cancer patients for hypermethylation of the promoter region of the APC gene. We used the maximal chi-square statistic to identify a discriminatory cutoff value for hypermethylated APC DNA levels in plasma and used bootstrap-like simulations to determine the P value to test for the strength of this association. This cutoff value was used to generate KaplanMeier survival curves. All P values were based on two-sided tests. Results: Hypermethylation of the promoter region of the APC gene occurred in abnormal esophageal tissue in 48 (92%) of 52 patients with esophageal adenocarcinoma, in 16 (50%) of 32 patients with esophageal squamous cell carcinoma, and in 17 (39.5%) of 43 patients with Barrett's metaplasia but not in matching normal esophageal tissues. Hypermethylated APC DNA was observed in the plasma of 13 (25%) of 52 adenocarcinoma patients and in two (6.3%) of 32 squamous carcinoma patients. High plasma levels of methylated APC DNA were statistically significantly associated with reduced patient survival (P = .016). Conclusion: The APC promoter region was hypermethylated in tumors of the majority of patients with primary esophageal adenocarcinomas. Levels of hypermethylated APC gene DNA in the plasma may be a useful biomarker of biologically aggressive disease in esophageal adenocarcinoma patients and should be evaluated as a potential biomarker in additional tumor types.
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